diff --git a/autoconf/configure.ac b/autoconf/configure.ac
index 1ae8c1cdd82..629d61425e5 100644
--- a/autoconf/configure.ac
+++ b/autoconf/configure.ac
@@ -147,6 +147,14 @@ AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Applications/aha/Makefile)
 AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Applications/sgefa/Makefile)
 AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/Makefile)
 AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/Fhourstones/Makefile)
+AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/FreeBench/Makefile)
+AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/FreeBench/analyzer/Makefile)
+AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/FreeBench/distray/Makefile)
+AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/FreeBench/fourinarow/Makefile)
+AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/FreeBench/mason/Makefile)
+AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/FreeBench/neural/Makefile)
+AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/FreeBench/pcompress2/Makefile)
+AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/FreeBench/pifft/Makefile)
 AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/McCat/Makefile)
 AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/McCat/01-qbsort/Makefile)
 AC_CONFIG_MAKEFILE(test/Programs/MultiSource/Benchmarks/McCat/03-testtrie/Makefile)