diff --git a/tools/cooja/apps/serial2pipe/build.xml b/backyard/tools/cooja/apps/serial2pipe/build.xml
similarity index 100%
rename from tools/cooja/apps/serial2pipe/build.xml
rename to backyard/tools/cooja/apps/serial2pipe/build.xml
diff --git a/tools/cooja/apps/serial2pipe/cooja.config b/backyard/tools/cooja/apps/serial2pipe/cooja.config
similarity index 98%
rename from tools/cooja/apps/serial2pipe/cooja.config
rename to backyard/tools/cooja/apps/serial2pipe/cooja.config
index 766cefd53..cb9f805fe 100644
--- a/tools/cooja/apps/serial2pipe/cooja.config
+++ b/backyard/tools/cooja/apps/serial2pipe/cooja.config
@@ -1,2 +1,2 @@
-se.sics.cooja.GUI.PLUGINS = + se.sics.cooja.plugins.Serial2Pipe
-se.sics.cooja.GUI.JARFILES = + serial2pipe.jar
+se.sics.cooja.GUI.PLUGINS = + se.sics.cooja.plugins.Serial2Pipe
+se.sics.cooja.GUI.JARFILES = + serial2pipe.jar
diff --git a/tools/cooja/apps/serial2pipe/java/se/sics/cooja/plugins/Serial2Pipe.java b/backyard/tools/cooja/apps/serial2pipe/java/se/sics/cooja/plugins/Serial2Pipe.java
similarity index 98%
rename from tools/cooja/apps/serial2pipe/java/se/sics/cooja/plugins/Serial2Pipe.java
rename to backyard/tools/cooja/apps/serial2pipe/java/se/sics/cooja/plugins/Serial2Pipe.java
index 102d7a434..5f3faeccc 100644
--- a/tools/cooja/apps/serial2pipe/java/se/sics/cooja/plugins/Serial2Pipe.java
+++ b/backyard/tools/cooja/apps/serial2pipe/java/se/sics/cooja/plugins/Serial2Pipe.java
@@ -26,7 +26,7 @@
  * OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
  * SUCH DAMAGE.
  *
- * $Id: Serial2Pipe.java,v 1.1 2007/02/26 13:28:14 fros4943 Exp $
+ * $Id: Serial2Pipe.java,v 1.1 2009/05/18 14:48:10 fros4943 Exp $
  */
 
 package se.sics.cooja.plugins;
diff --git a/tools/cooja/examples/project_debug/build.xml b/backyard/tools/cooja/examples/project_debug/build.xml
similarity index 100%
rename from tools/cooja/examples/project_debug/build.xml
rename to backyard/tools/cooja/examples/project_debug/build.xml
diff --git a/tools/cooja/examples/project_debug/cooja.config b/backyard/tools/cooja/examples/project_debug/cooja.config
similarity index 97%
rename from tools/cooja/examples/project_debug/cooja.config
rename to backyard/tools/cooja/examples/project_debug/cooja.config
index 6ee25db85..d59479393 100644
--- a/tools/cooja/examples/project_debug/cooja.config
+++ b/backyard/tools/cooja/examples/project_debug/cooja.config
@@ -1 +1 @@
-se.sics.cooja.GUI.PLUGINS = + MoteDebugger
+se.sics.cooja.GUI.PLUGINS = + MoteDebugger
diff --git a/tools/cooja/examples/project_debug/java/MoteDebugger.java b/backyard/tools/cooja/examples/project_debug/java/MoteDebugger.java
similarity index 99%
rename from tools/cooja/examples/project_debug/java/MoteDebugger.java
rename to backyard/tools/cooja/examples/project_debug/java/MoteDebugger.java
index 0880c646b..8fc573605 100644
--- a/tools/cooja/examples/project_debug/java/MoteDebugger.java
+++ b/backyard/tools/cooja/examples/project_debug/java/MoteDebugger.java
@@ -26,7 +26,7 @@
  * OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
  * SUCH DAMAGE.
  *
- * $Id: MoteDebugger.java,v 1.1 2007/03/23 23:33:55 fros4943 Exp $
+ * $Id: MoteDebugger.java,v 1.1 2009/05/18 14:48:10 fros4943 Exp $
  */
 
 import java.awt.event.*;
diff --git a/tools/cooja/apps/serial2pipe/lib/serial2pipe.jar b/tools/cooja/apps/serial2pipe/lib/serial2pipe.jar
deleted file mode 100644
index a485e72de..000000000
Binary files a/tools/cooja/apps/serial2pipe/lib/serial2pipe.jar and /dev/null differ